clusterSpatialCorGenes

Source: R/spatial_genes.R

Cluster based on spatially correlated genes

clusterSpatialCorGenes(
  spatCorObject,
  name = "spat_clus",
  hclust_method = "ward.D",
  k = 10,
  return_obj = TRUE
)

Arguments

spatCorObject

spatial correlation object
name

name for spatial clustering results
hclust_method

method for hierarchical clustering
k

number of clusters to extract
return_obj

return spatial correlation object (spatCorObject)

Value

spatCorObject or cluster results