spatNetwDistributionsDistance

Source: R/spatial_structures.R

This function return histograms displaying the distance distribution for each spatial k-neighbor

spatNetwDistributionsDistance(
  gobject,
  spatial_network_name = "spatial_network",
  hist_bins = 30,
  test_distance_limit = NULL,
  ncol = 1,
  show_plot = NA,
  return_plot = NA,
  save_plot = NA,
  save_param = list(),
  default_save_name = "spatNetwDistributionsDistance"
)

Arguments

gobject

Giotto object
spatial_network_name

name of spatial network
hist_bins

number of binds to use for the histogram
test_distance_limit

effect of different distance threshold on k-neighbors
ncol

number of columns to visualize the histograms in
show_plot

show plot
return_plot

return ggplot object
save_plot

directly save the plot [boolean]
save_param

list of saving parameters from all_plots_save_function
default_save_name

default save name for saving, alternatively change save_name in save_param

Value

ggplot plot