Creates an additional metadata column with information about interacting and non-interacting cell types of the selected cell-cell interaction.
addCellIntMetadata(
gobject,
spatial_network = "spatial_network",
cluster_column,
cell_interaction,
name = "select_int",
return_gobject = TRUE
)
giotto object
name of spatial network to use
column of cell types
cell-cell interaction to use
name for the new metadata column
return an updated giotto object
Giotto object
This function will create an additional metadata column which selects interacting cell types for a specific cell-cell interaction. For example, if you want to color interacting astrocytes and oligodendrocytes it will create a new metadata column with the values "select_astrocytes", "select_oligodendrocytes", "other_astrocytes", "other_oligodendroyctes" and "other". Where "other" is all other cell types found within the selected cell type column.