calculateMetaTableCells

Source: R/auxiliary_giotto.R

calculates the average metadata values for one or more (combined) annotation columns.

calculateMetaTableCells(
  gobject,
  value_cols = NULL,
  metadata_cols = NULL,
  spat_enr_names = NULL
)

Arguments

gobject

giotto object

value_cols

metadata or enrichment value columns to use

metadata_cols

annotation columns found in pDataDT(gobject)

spat_enr_names

which spatial enrichment results to include

Value

data.table with average metadata values per (combined) annotation