createRegZStackGobject

create registered z stacked 3D gobject. Images not supported

createRegZStackGobject(
  expression_list,
  spatlocs_list,
  xvals,
  yvals,
  scalefactor = 1,
  transformXML,
  z_vals,
  instructions = NULL
)

Arguments

expression_list

list of expression values to use

spatlocs_list

list of spatlocs to use

xvals

x value spatial input

yvals

y value spatial input

scalefactor

scale spatial coords to pixel coords

transformXML

transformation files to use

z_vals

z values to use in z stacking. In order of expression_list and spatloc_list.

instructions

instructions for Giotto processing