Visualize cells and gene expression in a virtual cross section according to spatial coordinates
crossSectionGenePlot(
gobject = NULL,
crossSection_obj = NULL,
name = NULL,
spatial_network_name = "Delaunay_network",
default_save_name = "crossSectionGenePlot",
...
)
giotto object
crossSection object
name of virtual cross section to use
name of spatial network to use
default save name for saving, don't change, change save_name in save_param
parameters for spatGenePlot2D
ggplot
Description of parameters.