extractNearestNetwork

Function to calculate gene signature enrichment scores per spatial position using a rank based approach.

extractNearestNetwork(...)

Arguments

...

Arguments passed on to select_NearestNetwork

gobject

giotto object

nn_network_to_use

kNN or sNN

network_name

name of NN network to be used

output

return a igraph or data.table object

See also

select_NearestNetwork