get10Xmatrix_h5

This function creates an expression matrix from a 10X h5 file path

get10Xmatrix_h5(path_to_data, gene_ids = c("symbols", "ensembl"))

Arguments

path_to_data

path to the 10X .h5 file

gene_ids

use gene symbols (default) or ensembl ids for the gene expression matrix

Value

(list of) sparse expression matrix from 10X

Details

If the .h5 10x file has multiple modalities (e.g. RNA and protein), multiple matrices will be returned