Rank spatial correlated clusters according to correlation structure
rankSpatialCorGroups(
gobject,
spatCorObject,
use_clus_name = NULL,
show_plot = NA,
return_plot = FALSE,
save_plot = NA,
save_param = list(),
default_save_name = "rankSpatialCorGroups"
)
giotto object
spatial correlation object
name of clusters to visualize (from clusterSpatialCorGenes())
show plot
return ggplot object
directly save the plot [boolean]
list of saving parameters, see showSaveParameters
default save name for saving, don't change, change save_name in save_param
data.table with positive (within group) and negative (outside group) scores