Function to perform DWLS deconvolution based on single cell expression data
runDWLSDeconv(
gobject,
expression_values = c("normalized"),
logbase = 2,
cluster_column = "leiden_clus",
sign_matrix,
n_cell = 50,
cutoff = 2,
name = NULL,
return_gobject = TRUE
)
giotto object
expression values to use
base used for log normalization
name of cluster column
sig matrix for deconvolution
number of cells per spot
cut off (default = 2)
name to give to spatial deconvolution results, default = DWLS
return giotto object
giotto object or deconvolution results