subsetGiotto — subsetGiotto • Giotto

subsets Giotto object including previous analyses.

subsetGiotto(gobject, cell_ids = NULL, gene_ids = NULL, verbose = FALSE)

Arguments

gobject: giotto object
cell_ids: cell IDs to keep
gene_ids: gene IDs to keep
verbose: be verbose

Value

giotto object

Examples

# \donttest{

data(mini_giotto_single_cell)

random_cells = sample(slot(mini_giotto_single_cell, 'cell_ID'), 10)
random_genes = sample(slot(mini_giotto_single_cell, 'gene_ID'), 10)

subset_obj = subsetGiotto(mini_giotto_single_cell,
                         cell_ids = random_cells,
                         gene_ids = random_genes)

# }